Basic Information
Locus ID:
gene-BS78_01G146800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 11337516 | 11342180 | - | gene-BS78_01G146800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 52,364.80 Da | 45.82 | 101.40 | 0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 305 | 477 | 1.5E-12 | IPR005828 |
| Pfam | PF00083 | Sugar (and other) transporter | 59 | 222 | 5.4E-29 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 7 | 476 | 2.75E-63 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 16 | 479 | 1.1E-79 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 22 | 474 | 34.985081 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 350 | 365 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | NP_001106048.1 | major facilitator superfamily protein [Zea mays] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A5YMH6 | Major facilitator superfamily protein OS=Zea mays OX=4577 GN=100125647 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology