Basic Information
Locus ID:
gene-BS78_01G131500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 10042526 | 10043596 | + | gene-BS78_01G131500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 39,211.10 Da | 50.87 | 81.71 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 36 | 328 | 2.7E-59 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 338 | 4.59E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 29 | 116 | 4.7E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 354 | 6.1E-60 | - |
| SMART | SM00220 | serkin_6 | 36 | 328 | 8.5E-87 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 36 | 328 | 43.410473 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 42 | 65 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 158 | 170 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004982274.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | K4AJX3 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101764992 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology