Basic Information
Locus ID:
gene-BS78_01G120600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9145421 | 9150304 | - | gene-BS78_01G120600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 67,634.87 Da | 37.94 | 86.61 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 276 | 574 | 1.14738E-127 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 245 | 561 | 4.3E-95 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 276 | 584 | 8.72E-71 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 278 | 579 | 6.2E-44 | IPR029044 |
| Coils | Coil | Coil | 145 | 175 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | NP_001169332.1 | Polygalacturonate 4-alpha-galacturonosyltransferase precursor [Zea mays] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811SMC1 | Hexosyltransferase OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS68149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology