Basic Information
Locus ID:
gene-BS78_01G105200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 7876392 | 7880929 | - | gene-BS78_01G105200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 66,325.45 Da | 49.88 | 73.63 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 469 | 583 | 1.8E-8 | IPR001525 |
| SUPERFAMILY | SSF46934 | UBA-like | 140 | 186 | 3.51E-7 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 274 | 466 | 1.12E-22 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 469 | 585 | 6.66E-20 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 44 | 97 | 2.3E-8 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 145 | 200 | 1.6E-7 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 260 | 358 | 3.4E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 461 | 591 | 3.7E-27 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 469 | 592 | 20.867868 | IPR001525 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 54 | 95 | 10.088989 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 266 | 592 | 126.856773 | IPR030380 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 153 | 197 | 10.835999 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 244 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_004986027.1 | DNA (cytosine-5)-methyltransferase DRM2 [Setaria italica] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | K4A7C3 | SAM-dependent MTase DRM-type domain-containing protein OS=Setaria italica OX=4555 GN=101784586 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology