Basic Information
Locus ID:
gene-BS78_01G103300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 7765742 | 7769901 | + | gene-BS78_01G103300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 103,167.53 Da | 38.59 | 85.32 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 622 | 894 | 4.44551E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 619 | 847 | 1.6E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 84 | 6.7E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 353 | 387 | 0.025 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 593 | 903 | 3.63E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 351 | 457 | 5.1E-16 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 323 | 1.87E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 349 | 476 | 7.7E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 577 | 693 | 2.3E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 346 | 1.7E-74 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 912 | 2.8E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 133 | 156 | 0.05 | IPR003591 |
| SMART | SM00220 | serkin_6 | 616 | 902 | 4.1E-46 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 256 | 278 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 413 | 437 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 229 | 81.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 616 | 897 | 41.219704 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 622 | 644 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 950 | 971 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 504 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_004981977.1 | receptor protein kinase TMK1 [Setaria italica] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | K4A5E7 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101782673 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology