Basic Information
Locus ID:
gene-BS78_01G081600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 6077599 | 6081693 | - | gene-BS78_01G081600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 63,224.39 Da | 49.62 | 67.57 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 69 | 498 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 335 | 498 | 6.3E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 80 | 221 | 2.0E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 77 | 510 | 9.35E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 162 | 1.4E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 163 | 499 | 4.2E-80 | - |
| SMART | SM00220 | serkin_6 | 80 | 498 | 6.2E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 80 | 498 | 31.382439 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 207 | 219 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 86 | 109 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 571 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 493 | 571 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_002466460.2 | SRSF protein kinase 1 [Sorghum bicolor] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811MM74 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS4315 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology