Basic Information
Locus ID:
gene-BS78_01G080100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 5994641 | 6002621 | - | gene-BS78_01G080100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 144,935.05 Da | 50.15 | 86.54 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 41 | 372 | 6.8E-113 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 35 | 405 | 3.12E-119 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 29 | 384 | 4.2E-137 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 33 | 380 | 5.8E-164 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 35 | 372 | 124.090668 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 268 | 279 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 322 | 343 | 2.4E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 107 | 128 | 2.4E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 236 | 253 | 2.4E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 269 | 287 | 2.4E-41 | IPR001752 |
| Coils | Coil | Coil | 516 | 543 | - | - |
| Coils | Coil | Coil | 379 | 406 | - | - |
| Coils | Coil | Coil | 617 | 708 | - | - |
| Coils | Coil | Coil | 1012 | 1032 | - | - |
| Coils | Coil | Coil | 1040 | 1067 | - | - |
| Coils | Coil | Coil | 818 | 866 | - | - |
| Coils | Coil | Coil | 723 | 743 | - | - |
| Coils | Coil | Coil | 1208 | 1228 | - | - |
| Coils | Coil | Coil | 934 | 954 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_034573576.1 | kinesin-like protein KIN-12G [Setaria viridis] | 0 |
| Q75LL2 | Kinesin-like protein KIN-12G OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12G PE=3 SV=1 | 0 | |
| TrEMBL | A0A4U6SVQ2 | Kinesin motor domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G089400v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology