Basic Information
Locus ID:
gene-BS78_01G076300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 5682876 | 5688753 | + | gene-BS78_01G076300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 115,291.83 Da | 42.12 | 100.25 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 794 | 1062 | 5.77042E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 160 | 220 | 7.7E-12 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 79 | 6.2E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 551 | 609 | 5.1E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 791 | 988 | 3.4E-43 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 360 | 376 | 0.37 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 766 | 1059 | 2.02E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 313 | 666 | 1.02E-34 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 149 | 405 | 3.74E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 751 | 863 | 7.6E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 200 | 1.5E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 298 | 410 | 6.7E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 864 | 1065 | 2.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 297 | 1.1E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 414 | 688 | 8.8E-46 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 361 | 385 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 572 | 596 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 620 | 644 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 255 | 279 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 231 | 6.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 206 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 32.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 788 | 1040 | 9.8E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 788 | 1062 | 39.22681 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 794 | 816 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 908 | 920 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 596 | 609 | 3.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 186 | 199 | 3.3E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 716 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_002463860.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Sorghum bicolor] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811MGE7 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS4381 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology