Basic Information
Locus ID:
gene-BS78_01G065200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4868338 | 4872969 | + | gene-BS78_01G065200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 84,050.90 Da | 45.31 | 91.39 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 65 | 7.3E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 613 | 1.9E-17 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 393 | 688 | 8.54E-40 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 246 | 2.81E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 391 | 484 | 8.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 269 | 2.4E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 712 | 4.8E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 412 | 693 | 20.075239 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 384 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034573322.1 | probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Setaria viridis] | 0 |
| C0LGK4 | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6SSV1 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G072400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology