Basic Information
Locus ID:
gene-BS78_01G053900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 3856040 | 3858084 | - | gene-BS78_01G053900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 17,618.03 Da | 47.59 | 88.00 | 0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 125 | 2.95343E-45 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 119 | 5.4E-23 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 126 | 9.97E-33 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 130 | 4.9E-36 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 127 | 36.317692 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27200.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_025798160.1 | basic blue protein-like [Panicum hallii] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A2S3IH92 | Phytocyanin domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G056300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology