Basic Information
Locus ID:
gene:TRIDC7BG076690
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 752647587 | 752657033 | + | gene:TRIDC7BG076690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 30,228.64 Da | 39.24 | 97.42 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 132 | 168 | 1.2E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 95 | 124 | 0.079 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 7 | 255 | 3.85E-34 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 251 | 2.8E-47 | IPR015943 |
| SMART | SM00320 | WD40_4 | 171 | 209 | 0.21 | IPR001680 |
| SMART | SM00320 | WD40_4 | 127 | 168 | 3.8E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1 | 40 | 70.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 86 | 124 | 0.068 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 134 | 170 | 9.124694 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 102 | 127 | 9.372231 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 134 | 177 | 11.277069 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 155 | 169 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 111 | 125 | 4.7E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 196 | 210 | 4.7E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 155 | 169 | 4.7E-5 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79990.2 | structural molecules. | 0 |
| RefSeq | XP_037465545.1 | uncharacterized protein LOC119337485 isoform X5 [Triticum dicoccoides] | 0 |
| Q9CAA0 | Coatomer subunit beta'-1 OS=Arabidopsis thaliana OX=3702 GN=At1g79990 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8R7VCS2 | Coatomer subunit beta'-2 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG076690.