Basic Information
Locus ID:
gene:TRIDC7BG073200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 735317619 | 735320196 | + | gene:TRIDC7BG073200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 71,117.35 Da | 45.26 | 105.62 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 274 | 316 | 9.34946E-25 | - |
| Pfam | PF04564 | U-box domain | 270 | 341 | 1.0E-22 | IPR003613 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 392 | 431 | 2.6E-5 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 475 | 512 | 4.7E-5 | IPR000225 |
| SUPERFAMILY | SSF57850 | RING/U-box | 270 | 344 | 9.27E-30 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 350 | 633 | 9.46E-43 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 269 | 345 | 6.8E-30 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 346 | 640 | 1.1E-46 | IPR011989 |
| SMART | SM00185 | arm_5 | 433 | 473 | 24.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 349 | 390 | 420.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 515 | 555 | 23.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 392 | 432 | 0.009 | IPR000225 |
| SMART | SM00185 | arm_5 | 474 | 514 | 2.9 | IPR000225 |
| SMART | SM00504 | Ubox_2 | 273 | 336 | 3.4E-31 | IPR003613 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 403 | 445 | 11.3574 | IPR000225 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 269 | 343 | 38.586708 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42340.1 | Plant U-Box 15. | 0 |
| RefSeq | XP_044434479.1 | U-box domain-containing protein 15-like [Triticum aestivum] | 0 |
| Q681N2 | U-box domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=PUB15 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6SU19 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG073200.