Basic Information
Locus ID:
gene:TRIDC7BG068730
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Utp21 specific WD40 associated putative domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 707703135 | 707711506 | - | gene:TRIDC7BG068730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.79 | 106,233.24 Da | 54.80 | 84.69 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 596 | 632 | 5.1E-11 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 237 | 323 | 7.0E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 355 | 388 | 0.26 | IPR001680 |
| Pfam | PF04192 | Utp21 specific WD40 associated putative domain | 718 | 948 | 9.7E-64 | IPR007319 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 199 | 654 | 1.88E-56 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 49 | 676 | 1.5E-229 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 59 | 360 | 1.5E-229 | IPR015943 |
| SMART | SM00320 | WD40_4 | 350 | 389 | 0.0081 | IPR001680 |
| SMART | SM00320 | WD40_4 | 511 | 549 | 0.46 | IPR001680 |
| SMART | SM00320 | WD40_4 | 552 | 590 | 2.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 259 | 300 | 0.0091 | IPR001680 |
| SMART | SM00320 | WD40_4 | 635 | 674 | 56.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 217 | 256 | 0.0014 | IPR001680 |
| SMART | SM00320 | WD40_4 | 129 | 166 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 303 | 343 | 0.16 | IPR001680 |
| SMART | SM00320 | WD40_4 | 173 | 214 | 480.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 593 | 632 | 2.0E-12 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 600 | 641 | 16.891327 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 311 | 342 | 9.414692 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 311 | 342 | 11.243651 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 600 | 634 | 13.501034 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 517 | 558 | 9.004632 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 619 | 633 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04940.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037465077.1 | U3 small nucleolar RNA-associated protein 21 homolog [Triticum dicoccoides] | 0 |
| O14053 | U3 small nucleolar RNA-associated protein 21 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1672.07 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6SU46 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG068730.