Basic Information
Locus ID:
gene:TRIDC7BG065460
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin-2 like Rad60 SUMO-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 689731208 | 689732140 | + | gene:TRIDC7BG065460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 8,858.06 Da | 47.04 | 101.12 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01806 | Ubl_NEDD8 | 6 | 79 | 1.52396E-47 | IPR038738 |
| Pfam | PF00240 | Ubiquitin family | 6 | 77 | 4.9E-29 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 79 | 5.8E-29 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 80 | 4.0E-36 | - |
| SMART | SM00213 | ubq_7 | 4 | 75 | 1.2E-27 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 4 | 79 | 26.59786 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 30 | 55 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 56 | 77 | 3.3E-24 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 14 | 34 | 3.3E-24 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 35 | 55 | 3.3E-24 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31340.1 | related to ubiquitin 1. Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response. | 0 |
| RefSeq | XP_002437367.1 | ubiquitin-NEDD8-like protein RUB2 [Sorghum bicolor] | 0 |
| P0C031 | Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453T4R5 | Ubiquitin-NEDD8-like protein RUB2 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG065460.