Basic Information
Locus ID:
gene:TRIDC7BG064180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 681764470 | 682068113 | + | gene:TRIDC7BG064180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 106,276.13 Da | 54.53 | 64.05 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 94 | 399 | 2.6079E-158 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 94 | 398 | 1.3E-43 | IPR001394 |
| Pfam | PF01753 | MYND finger | 1 | 25 | 3.2E-5 | IPR002893 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 93 | 400 | 5.69E-83 | IPR038765 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 1 | 29 | 1.41E-6 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 92 | 406 | 2.1E-88 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 1 | 33 | 3.2E-7 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 1 | 25 | 9.226089 | IPR002893 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 94 | 401 | 49.258724 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 95 | 110 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 544 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 797 | 821 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 729 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 633 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 752 | 771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 946 | 963 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 700 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 805 | 820 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 936 | 963 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24640.1 | ubiquitin-specific protease 19. | 0 |
| RefSeq | XP_037463818.1 | ubiquitin carboxyl-terminal hydrolase 19-like [Triticum dicoccoides] | 0 |
| Q9SJA1 | Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6SN85 | Ubiquitin carboxyl-terminal hydrolase 18 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG064180.