Basic Information
Locus ID:
gene:TRIDC7BG060270
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin elongating factor core
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 651668573 | 651672923 | - | gene:TRIDC7BG060270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 92,763.68 Da | 47.38 | 92.92 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16657 | RING-Ubox_UBE4A | 728 | 797 | 5.62203E-38 | - |
| Pfam | PF10408 | Ubiquitin elongating factor core | 79 | 709 | 2.6E-204 | IPR019474 |
| Pfam | PF04564 | U-box domain | 726 | 797 | 4.9E-28 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 718 | 795 | 3.88E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 725 | 805 | 1.6E-26 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 729 | 792 | 8.8E-22 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 725 | 799 | 28.308006 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 798 | 819 | - | - |
| Coils | Coil | Coil | 304 | 324 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15400.1 | U-box domain-containing protein. | 0 |
| RefSeq | XP_037465646.1 | probable ubiquitin conjugation factor E4 [Triticum dicoccoides] | 0 |
| Q9LF41 | Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana OX=3702 GN=PUB1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453SZT3 | U-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG060270.