HalophFGD

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Basic Information
Locus ID: gene:TRIDC7BG059730
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
Chromosome Start End Strand ID
7B 648488999 648496038 - gene:TRIDC7BG059730
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.91 25,723.50 Da 37.99 100.51 0.15
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18280 BTB_POZ_BPM_plant 52 167 1.07142E-48 -
Pfam PF00651 BTB/POZ domain 58 167 1.5E-24 IPR000210
SUPERFAMILY SSF54695 POZ domain 44 167 1.65E-31 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 41 165 4.8E-37 IPR011333
Gene3D G3DSA:1.25.40.420 - 170 235 1.2E-18 -
SMART SM00225 BTB_4 66 170 1.7E-20 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 66 133 17.231152 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19000.1 BTB-POZ and MATH domain 1. 0
RefSeq XP_037470324.1 BTB/POZ and MATH domain-containing protein 1-like, partial [Triticum dicoccoides] 0
Swiss-Prot Q8L765 BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 0
TrEMBL A0A453SZ23 BTB domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC7BG059730.

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