Basic Information
Locus ID:
gene:TRIDC7BG059060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 643859670 | 643860274 | - | gene:TRIDC7BG059060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 9,305.59 Da | 32.65 | 102.17 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01803 | Ubl_ubiquitin | 7 | 82 | 5.7222E-52 | - |
| Pfam | PF00240 | Ubiquitin family | 9 | 80 | 9.1E-35 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 82 | 5.18E-36 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 83 | 1.7E-48 | - |
| SMART | SM00213 | ubq_7 | 7 | 78 | 3.0E-35 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 82 | 30.452106 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 33 | 58 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 38 | 58 | 1.7E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 17 | 37 | 1.7E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 59 | 80 | 1.7E-39 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_022767381.1 | polyubiquitin [Durio zibethinus] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A411EWN6 | Ubiquitin (Fragment) OS=Avena sativa OX=4498 GN=UBQ PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG059060.