Basic Information
Locus ID:
gene:TRIDC7BG058620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 639734962 | 639738781 | - | gene:TRIDC7BG058620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 34,958.50 Da | 43.31 | 91.35 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 83 | 161 | 3.4E-5 | IPR024977 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 9 | 284 | 1.73E-32 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 285 | 8.4E-50 | IPR015943 |
| SMART | SM00320 | WD40_4 | 10 | 48 | 350.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 65 | 103 | 0.29 | IPR001680 |
| SMART | SM00320 | WD40_4 | 240 | 279 | 0.019 | IPR001680 |
| SMART | SM00320 | WD40_4 | 197 | 236 | 5.2 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 120 | 154 | 8.703868 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50550.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037469188.1 | SEC12-like protein 2 [Triticum dicoccoides] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A3B6SR29 | ANAPC4_WD40 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG058620.