Basic Information
Locus ID:
gene:TRIDC7BG058530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 637986430 | 637987355 | + | gene:TRIDC7BG058530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 17,159.46 Da | 29.10 | 100.65 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01803 | Ubl_ubiquitin | 77 | 152 | 1.18907E-50 | - |
| CDD | cd01803 | Ubl_ubiquitin | 1 | 76 | 1.18907E-50 | - |
| Pfam | PF00240 | Ubiquitin family | 3 | 74 | 5.7E-34 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 79 | 150 | 5.7E-34 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 76 | 152 | 1.14E-34 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 76 | 3.05E-34 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 77 | 153 | 2.2E-47 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 76 | 2.2E-47 | - |
| SMART | SM00213 | ubq_7 | 77 | 148 | 3.0E-35 | IPR000626 |
| SMART | SM00213 | ubq_7 | 1 | 72 | 3.0E-35 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 76 | 30.452106 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 77 | 152 | 30.452106 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 27 | 52 | - | IPR019954 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 103 | 128 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 32 | 52 | 5.2E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 53 | 74 | 5.2E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 11 | 31 | 5.2E-39 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_037432675.1 | polyubiquitin-like [Triticum dicoccoides] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0T8T0 | Polyubiquitin OS=Panicum virgatum OX=38727 GN=PVAP13_1NG021140 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG058530.