Basic Information
Locus ID:
gene:TRIDC7BG057490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of unknown function (DUF4704)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 629023376 | 629054139 | - | gene:TRIDC7BG057490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 265,622.63 Da | 43.11 | 96.36 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06071 | Beach | 1701 | 1978 | 3.42537E-149 | IPR000409 |
| CDD | cd01201 | PH_BEACH | 1522 | 1667 | 2.57885E-21 | IPR023362 |
| Pfam | PF00400 | WD domain, G-beta repeat | 2178 | 2211 | 0.0022 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 2113 | 2149 | 6.0E-6 | IPR001680 |
| Pfam | PF15787 | Domain of unknown function (DUF4704) | 466 | 740 | 3.8E-76 | IPR031570 |
| Pfam | PF13385 | Concanavalin A-like lectin/glucanases superfamily | 233 | 403 | 1.1E-8 | - |
| Pfam | PF14844 | PH domain associated with Beige/BEACH | 1529 | 1660 | 2.8E-14 | IPR023362 |
| Pfam | PF02138 | Beige/BEACH domain | 1701 | 1978 | 2.0E-120 | IPR000409 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 225 | 411 | 6.93E-19 | IPR013320 |
| SUPERFAMILY | SSF48371 | ARM repeat | 8 | 195 | 7.04E-7 | IPR016024 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2086 | 2345 | 2.23E-36 | IPR036322 |
| SUPERFAMILY | SSF50729 | PH domain-like | 1522 | 1666 | 6.02E-20 | - |
| SUPERFAMILY | SSF81837 | BEACH domain | 1685 | 1978 | 8.89E-124 | IPR036372 |
| Gene3D | G3DSA:2.30.29.30 | - | 1521 | 1660 | 1.1E-20 | IPR011993 |
| Gene3D | G3DSA:2.60.120.200 | - | 228 | 417 | 2.2E-13 | - |
| Gene3D | G3DSA:1.10.1540.10 | BEACH domain | 1692 | 1978 | 8.6E-136 | IPR036372 |
| Gene3D | G3DSA:2.130.10.10 | - | 2031 | 2270 | 1.4E-24 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 2271 | 2357 | 9.9E-6 | IPR015943 |
| Gene3D | G3DSA:1.25.10.10 | - | 2 | 227 | 5.1E-6 | IPR011989 |
| SMART | SM00320 | WD40_4 | 2301 | 2339 | 0.9 | IPR001680 |
| SMART | SM01026 | Beach_2 | 1700 | 1978 | 5.6E-196 | IPR000409 |
| SMART | SM00320 | WD40_4 | 2260 | 2298 | 86.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 2111 | 2150 | 7.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 2176 | 2215 | 0.0012 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 2118 | 2149 | 12.680634 | IPR001680 |
| ProSiteProfiles | PS50197 | BEACH domain profile. | 1688 | 1978 | 121.99015 | IPR000409 |
| ProSiteProfiles | PS51783 | BEACH-type PH domain profile. | 1518 | 1664 | 28.876709 | IPR023362 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 2118 | 2149 | 10.548323 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1477 | 1515 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1477 | 1501 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58230.2 | - | 0 |
| RefSeq | XP_037466219.1 | BEACH domain-containing protein B-like isoform X1 [Triticum dicoccoides] | 0 |
| F4I9T0 | BEACH domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=BCHB PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6SQU6 | DUF4704 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG057490.