Basic Information
Locus ID:
gene:TRIDC7BG056540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
protein Sb04g004280 source
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 620971531 | 620972745 | - | gene:TRIDC7BG056540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 15,969.24 Da | 46.52 | 99.45 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01803 | Ubl_ubiquitin | 32 | 107 | 1.06222E-52 | - |
| Pfam | PF00240 | Ubiquitin family | 110 | 145 | 9.5E-12 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 34 | 105 | 5.0E-34 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 107 | 145 | 2.16E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 31 | 107 | 6.91E-35 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 108 | 145 | 1.7E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 29 | 107 | 5.5E-48 | - |
| SMART | SM00213 | ubq_7 | 108 | 145 | 14.0 | IPR000626 |
| SMART | SM00213 | ubq_7 | 32 | 103 | 3.0E-35 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 32 | 107 | 30.452106 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 108 | 145 | 12.879359 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 58 | 83 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 84 | 105 | 5.0E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 42 | 62 | 5.0E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 63 | 83 | 5.0E-39 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_048541882.1 | polyubiquitin-like [Triticum urartu] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453SVE4 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG056540.