Basic Information
Locus ID:
gene:TRIDC7BG052580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 590322077 | 590325491 | - | gene:TRIDC7BG052580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 63,376.50 Da | 61.71 | 63.22 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 537 | 571 | 3.1E-6 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 529 | 571 | 7.71E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 515 | 572 | 2.8E-10 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 351 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24870.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037466328.1 | probable E3 ubiquitin-protein ligase RHG1A [Triticum dicoccoides] | 0 |
| Q7XTV7 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6SR94 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG052580.