Basic Information
Locus ID:
gene:TRIDC7BG050220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
HECT-domain (ubiquitin-transferase)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 566137435 | 566170840 | + | gene:TRIDC7BG050220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 98,448.48 Da | 37.19 | 97.70 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 729 | 870 | 1.5E-46 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 633 | 725 | 5.5E-13 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 569 | 870 | 1.96E-82 | IPR035983 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 764 | 870 | 6.0E-34 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 540 | 761 | 1.0E-40 | - |
| SMART | SM00119 | hect_3 | 594 | 870 | 3.2E-53 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 596 | 870 | 51.065102 | IPR000569 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17205.2 | ubiquitin protein ligase 6. | 0 |
| RefSeq | XP_037465685.1 | E3 ubiquitin-protein ligase UPL6-like isoform X2 [Triticum dicoccoides] | 0 |
| Q8RWB8 | E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana OX=3702 GN=UPL6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SQR4 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG050220.