Basic Information
Locus ID:
gene:TRIDC7BG048050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 542175920 | 542177071 | + | gene:TRIDC7BG048050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 40,459.16 Da | 51.64 | 113.03 | 0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 7 | 49 | 4.53396E-22 | - |
| Pfam | PF04564 | U-box domain | 3 | 74 | 1.8E-16 | IPR003613 |
| SUPERFAMILY | SSF48371 | ARM repeat | 207 | 376 | 6.72E-9 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 3 | 75 | 1.06E-22 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 187 | 381 | 2.1E-9 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 77 | 2.5E-23 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 6 | 73 | 3.3E-23 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 2 | 80 | 29.245651 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49780.1 | plant U-box 26. | 0 |
| RefSeq | XP_020184633.2 | U-box domain-containing protein 25-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q10PI9 | U-box domain-containing protein 75 OS=Oryza sativa subsp. japonica OX=39947 GN=TUD1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SJJ6 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG048050.