Basic Information
Locus ID:
gene:TRIDC7BG047190
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 534835442 | 534836681 | + | gene:TRIDC7BG047190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 34,817.55 Da | 57.74 | 71.85 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 255 | 296 | 7.9E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 251 | 303 | 3.53E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 223 | 302 | 1.2E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 255 | 295 | 2.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 255 | 296 | 11.545086 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 329 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02340.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037467743.1 | E3 ubiquitin-protein ligase RING1-like [Triticum dicoccoides] | 0 |
| Q9SPL2 | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SQ19 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG047190.