Basic Information
Locus ID:
gene:TRIDC7BG046940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
PUX4
Description:
Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 533057567 | 533062990 | + | gene:TRIDC7BG046940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.63 | 46,113.72 Da | 62.50 | 57.65 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01770 | UBX_UBXN2 | 363 | 433 | 1.68031E-37 | - |
| Pfam | PF08059 | SEP domain | 248 | 321 | 7.5E-22 | IPR012989 |
| Pfam | PF00789 | UBX domain | 361 | 432 | 1.2E-18 | IPR001012 |
| Pfam | PF14555 | UBA-like domain | 8 | 47 | 9.6E-13 | - |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 316 | 433 | 4.21E-26 | IPR029071 |
| SUPERFAMILY | SSF46934 | UBA-like | 4 | 45 | 4.34E-9 | IPR009060 |
| SUPERFAMILY | SSF102848 | NSFL1 (p97 ATPase) cofactor p47, SEP domain | 237 | 328 | 8.63E-25 | IPR036241 |
| Gene3D | G3DSA:3.30.420.210 | SEP domain | 242 | 305 | 1.0E-21 | IPR036241 |
| Gene3D | G3DSA:3.10.20.90 | - | 308 | 434 | 1.1E-35 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 3 | 45 | 1.0E-13 | - |
| SMART | SM00166 | ubx_3 | 356 | 434 | 6.2E-8 | IPR001012 |
| SMART | SM00553 | faf_3 | 240 | 333 | 4.8E-32 | IPR012989 |
| ProSiteProfiles | PS51399 | SEP domain profile. | 243 | 307 | 28.824139 | IPR012989 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 357 | 433 | 20.144682 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 203 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04210.1 | plant UBX domain containing protein 4. Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4) | 0 |
| RefSeq | XP_037465200.1 | plant UBX domain-containing protein 4-like [Triticum dicoccoides] | 0 |
| Q8RWU7 | Plant UBX domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUX4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SJA5 | UBX domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG046940.