Basic Information
Locus ID:
gene:TRIDC7BG046770
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
S-locus glycoprotein domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 530855401 | 530857911 | - | gene:TRIDC7BG046770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 92,232.12 Da | 36.04 | 83.21 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00053 | EGF | 298 | 326 | 2.13939E-4 | - |
| CDD | cd14066 | STKc_IRAK | 540 | 825 | 5.66076E-87 | - |
| CDD | cd00028 | B_lectin | 53 | 160 | 4.94335E-22 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 341 | 421 | 5.49908E-13 | - |
| Pfam | PF01453 | D-mannose binding lectin | 86 | 173 | 8.9E-21 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 536 | 823 | 1.1E-44 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 351 | 400 | 1.6E-6 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 261 | 328 | 1.7E-9 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 514 | 825 | 2.05E-63 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 87 | 178 | 7.72E-24 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 502 | 608 | 2.3E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 609 | 834 | 7.5E-52 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 36 | 158 | 1.1E-18 | IPR036426 |
| SMART | SM00473 | ntp_6 | 346 | 429 | 5.7E-4 | IPR003609 |
| SMART | SM00108 | blect_4 | 44 | 160 | 6.9E-21 | IPR001480 |
| SMART | SM00220 | serkin_6 | 532 | 826 | 2.0E-18 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 7 | 835 | 1.4E-188 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 532 | 832 | 33.756954 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 38 | 158 | 16.110685 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 345 | 422 | 8.630426 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 652 | 664 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_044434168.1 | putative receptor protein kinase ZmPK1 [Triticum aestivum] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6SK28 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG046770.