Basic Information
Locus ID:
gene:TRIDC7BG046240
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 526925877 | 526934046 | + | gene:TRIDC7BG046240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 60,719.03 Da | 42.62 | 90.74 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 89 | 351 | 2.4324E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 90 | 352 | 8.9E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 89 | 372 | 7.28E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 378 | 530 | 1.16E-15 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 83 | 179 | 1.0E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 391 | 459 | 7.9E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 180 | 366 | 3.7E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 368 | 527 | 7.9E-14 | - |
| SMART | SM00220 | serkin_6 | 90 | 352 | 1.7E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 90 | 352 | 50.166527 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 96 | 122 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46700.1 | CDPK-related kinase 3. | 0 |
| RefSeq | XP_044958497.1 | CDPK-related kinase 3 [Hordeum vulgare subsp. vulgare] | 0 |
| Q9ZUZ2 | CDPK-related kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6YRK4 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG046240.