HalophFGD

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Basic Information
Locus ID: gene:TRIDC7BG043590
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: phosphatase 2A 55 kDa regulatory subunit B'
Maps and Mapping Data
Chromosome Start End Strand ID
7B 495623831 495633478 - gene:TRIDC7BG043590
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.58 59,000.01 Da 44.61 71.77 -0.57
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00400 WD domain, G-beta repeat 356 381 0.06 IPR001680
Pfam PF00400 WD domain, G-beta repeat 237 273 0.15 IPR001680
SUPERFAMILY SSF50978 WD40 repeat-like 52 518 3.66E-35 IPR036322
Gene3D G3DSA:2.130.10.10 - 226 341 1.1E-8 IPR015943
Gene3D G3DSA:2.130.10.10 - 49 196 1.3E-5 IPR015943
Gene3D G3DSA:2.130.10.10 - 342 522 3.3E-9 IPR015943
SMART SM00320 WD40_4 284 324 7.9 IPR001680
SMART SM00320 WD40_4 331 381 53.0 IPR001680
SMART SM00320 WD40_4 44 79 7.2 IPR001680
SMART SM00320 WD40_4 385 439 420.0 IPR001680
SMART SM00320 WD40_4 234 273 1.0 IPR001680
SMART SM00320 WD40_4 118 158 23.0 IPR001680
PIRSF PIRSF037309 PPA2_B55 21 526 1.5E-197 IPR000009
ProSitePatterns PS01024 Protein phosphatase 2A regulatory subunit PR55 signature 1. 118 132 - IPR018067
ProSitePatterns PS01025 Protein phosphatase 2A regulatory subunit PR55 signature 2. 243 257 - IPR018067
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 105 133 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 330 357 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 58 78 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 358 385 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 273 300 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 495 524 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 245 272 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 386 411 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 412 438 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 301 329 7.8E-159 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 134 162 7.8E-159 IPR000009
MobiDBLite mobidb-lite consensus disorder prediction 176 200 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 31 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding) GO:0019888 (protein phosphatase regulator activity)
Cellular Component:
GO:0000159 (protein phosphatase type 2A complex)
KEGG Pathway
KO Term:
K04354 (serine/threonine-protein phosphatase 2A regulatory subunit B)
Pathway:
ko03015 (mRNA surveillance pathway) map03015 (mRNA surveillance pathway) ko04071 (Sphingolipid signaling pathway) map04071 (Sphingolipid signaling pathway) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04390 (Hippo signaling pathway) map04390 (Hippo signaling pathway) ko04391 (Hippo signaling pathway - fly) map04391 (Hippo signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G17720.2 Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B 0
RefSeq XP_037464492.1 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like [Triticum dicoccoides] 0
Swiss-Prot Q5Z8Z7 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0563300 PE=2 SV=2 0
TrEMBL A0A3B6SG24 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Triticum aestivum OX=4565 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC7BG043590.

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