Basic Information
Locus ID:
gene:TRIDC7BG043020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 487610579 | 487615637 | + | gene:TRIDC7BG043020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 86,136.14 Da | 53.16 | 87.91 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 705 | 745 | 6.74541E-19 | - |
| CDD | cd01989 | STK_N | 34 | 157 | 4.56447E-32 | - |
| Pfam | PF00582 | Universal stress protein family | 17 | 149 | 8.0E-7 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 418 | 622 | 4.6E-39 | IPR000719 |
| Pfam | PF04564 | U-box domain | 701 | 769 | 4.7E-17 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 675 | 4.99E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 150 | 4.52E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 689 | 768 | 2.12E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 397 | 489 | 1.2E-25 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 701 | 771 | 3.9E-26 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 700 | 6.5E-45 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 10 | 155 | 1.9E-11 | IPR014729 |
| SMART | SM00220 | serkin_6 | 417 | 681 | 6.9E-29 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 704 | 766 | 4.5E-26 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 685 | 34.011364 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 700 | 771 | 32.978535 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 535 | 547 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 423 | 444 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 239 | - | - |
| Coils | Coil | Coil | 280 | 300 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57035.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037464925.1 | U-box domain-containing protein 34-like [Triticum dicoccoides] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6SFW5 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG043020.