Basic Information
Locus ID:
gene:TRIDC7BG042750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 485750368 | 485754035 | + | gene:TRIDC7BG042750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 120,872.21 Da | 35.23 | 107.28 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 129 | 151 | 0.78 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 9.7E-9 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 321 | 342 | 0.68 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 444 | 502 | 1.6E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 802 | 1101 | 6.2E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 782 | 1102 | 1.5E-62 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 468 | 723 | 1.87E-60 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 406 | 4.42E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 431 | 533 | 1.2E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 781 | 881 | 3.0E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 195 | 2.8E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 633 | 735 | 2.5E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 430 | 1.3E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 534 | 632 | 2.6E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 883 | 1114 | 8.0E-53 | - |
| SMART | SM00369 | LRR_typ_2 | 127 | 151 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 175 | 199 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 224 | 247 | 89.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 800 | 1103 | 3.2E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 491 | 515 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 415 | 437 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 539 | 563 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 612 | 636 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 684 | 709 | 50.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 800 | 1112 | 34.49192 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 806 | 829 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 931 | 943 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47580.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037463734.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SHX3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG042750.