Basic Information
Locus ID:
gene:TRIDC7BG042580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 484267025 | 484285898 | - | gene:TRIDC7BG042580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.53 | 74,508.75 Da | 42.57 | 104.45 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 442 | 629 | 3.2E-29 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 52 | 86 | 3.5E-7 | IPR025875 |
| Pfam | PF13855 | Leucine rich repeat | 272 | 331 | 2.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 2 | 337 | 2.28E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 630 | 5.26E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 520 | 637 | 1.2E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 365 | 3.3E-106 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 400 | 519 | 1.2E-22 | - |
| SMART | SM00220 | serkin_6 | 438 | 671 | 2.0E-10 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 318 | 343 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 173 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 73 | 100 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1 | 25 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 222 | 245 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 438 | 672 | 26.647549 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 444 | 467 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 569 | 581 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39390.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037460721.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453SBZ7 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG042580.