Basic Information
Locus ID:
gene:TRIDC7BG038930
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 448131255 | 448131688 | + | gene:TRIDC7BG038930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 15,453.89 Da | 55.16 | 90.14 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 85 | 128 | 8.36809E-18 | - |
| Pfam | PF13639 | Ring finger domain | 85 | 128 | 5.9E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 79 | 134 | 1.69E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 58 | 135 | 1.9E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 86 | 127 | 1.7E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 86 | 128 | 11.545086 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05810.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_048539645.1 | RING-H2 finger protein ATL39-like [Triticum urartu] | 0 |
| Q5EAE9 | RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6TGK3 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG038930.