Basic Information
Locus ID:
gene:TRIDC7BG038840
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 447384660 | 447385262 | - | gene:TRIDC7BG038840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 21,091.54 Da | 53.85 | 100.05 | 0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 134 | 177 | 3.52543E-16 | - |
| Pfam | PF13639 | Ring finger domain | 134 | 177 | 3.6E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 119 | 183 | 1.46E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 96 | 183 | 2.1E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 135 | 176 | 6.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 135 | 177 | 12.1057 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15975.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037469553.1 | RING-H2 finger protein ATL39-like [Triticum dicoccoides] | 0 |
| Q8LF65 | RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6SGS0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG038840.