Basic Information
Locus ID:
gene:TRIDC7BG037640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 433645139 | 433648508 | - | gene:TRIDC7BG037640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 50,812.11 Da | 65.17 | 69.56 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 61 | 112 | 5.9E-8 | IPR001810 |
| Pfam | PF01167 | Tub family | 123 | 453 | 2.6E-114 | IPR000007 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 109 | 458 | 3.4E-101 | IPR025659 |
| SUPERFAMILY | SSF81383 | F-box domain | 56 | 104 | 3.27E-6 | IPR036047 |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 119 | 452 | 1.7E-96 | IPR025659 |
| Gene3D | G3DSA:1.20.1280.50 | - | 57 | 107 | 1.1E-5 | - |
| ProSitePatterns | PS01200 | Tub family signature 1. | 362 | 375 | - | IPR018066 |
| ProSitePatterns | PS01201 | Tub family signature 2. | 443 | 458 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 242 | 269 | 4.5E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 176 | 192 | 4.5E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 415 | 434 | 4.5E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 362 | 378 | 4.5E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 436 | 458 | 4.5E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 192 | 216 | 4.5E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 344 | 361 | 4.5E-76 | IPR000007 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 414 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25280.1 | tubby like protein 10. Member of TLP family | 0 |
| RefSeq | XP_037466701.1 | tubby-like F-box protein 12 [Triticum dicoccoides] | 0 |
| Q69U54 | Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP12 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SER3 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG037640.