Basic Information
Locus ID:
gene:TRIDC7BG037260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
FAS2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 430151487 | 430156458 | - | gene:TRIDC7BG037260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 58,572.75 Da | 47.94 | 80.87 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 187 | 221 | 0.001 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 378 | 403 | 0.18 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 97 | 131 | 0.017 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 51 | 80 | 0.015 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 147 | 180 | 7.0E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 50 | 413 | 3.43E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 29 | 291 | 2.6E-45 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 292 | 450 | 2.8E-7 | IPR015943 |
| SMART | SM00320 | WD40_4 | 367 | 407 | 0.93 | IPR001680 |
| SMART | SM00320 | WD40_4 | 43 | 81 | 0.0052 | IPR001680 |
| SMART | SM00320 | WD40_4 | 141 | 180 | 1.8E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 93 | 132 | 2.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 183 | 222 | 2.0E-5 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 148 | 180 | 10.205597 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 148 | 189 | 12.480124 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 190 | 221 | 9.505904 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 56 | 90 | 10.441614 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 100 | 141 | 12.112524 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 100 | 135 | 10.047417 | - |
| PRINTS | PR00319 | Beta G protein (transducin) signature | 148 | 164 | 2.8E-5 | IPR001632 |
| PRINTS | PR00319 | Beta G protein (transducin) signature | 204 | 221 | 2.8E-5 | IPR001632 |
| PRINTS | PR00319 | Beta G protein (transducin) signature | 167 | 181 | 2.8E-5 | IPR001632 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 532 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64630.1 | Transducin/WD40 repeat-like superfamily protein. Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. | 0 |
| RefSeq | XP_037468367.1 | chromatin assembly factor 1 subunit FAS2 homolog [Triticum dicoccoides] | 0 |
| Q6ZD63 | Chromatin assembly factor 1 subunit FAS2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=FAS2 PE=2 SV=1 | 0 | |
| TrEMBL | M8D8A3 | WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG037260.