Basic Information
Locus ID:
gene:TRIDC7BG036060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 414487341 | 414493338 | - | gene:TRIDC7BG036060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 37,035.68 Da | 45.45 | 76.45 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16654 | RING-Ubox_CHIP | 250 | 316 | 3.58661E-42 | - |
| Pfam | PF04564 | U-box domain | 250 | 322 | 4.9E-25 | IPR003613 |
| SUPERFAMILY | SSF48452 | TPR-like | 65 | 187 | 2.74E-24 | IPR011990 |
| SUPERFAMILY | SSF57850 | RING/U-box | 245 | 324 | 1.2E-24 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 248 | 326 | 4.3E-25 | IPR013083 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 59 | 217 | 1.5E-26 | IPR011990 |
| SMART | SM00504 | Ubox_2 | 253 | 316 | 4.9E-25 | IPR003613 |
| SMART | SM00028 | tpr_5 | 136 | 169 | 10.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 68 | 101 | 2.8 | IPR019734 |
| SMART | SM00028 | tpr_5 | 102 | 135 | 0.0052 | IPR019734 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 249 | 323 | 31.978971 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07370.1 | carboxyl terminus of HSC70-interacting protein. Encodes AtCHIP, a new class of E3 ubiquitin ligases with three tetratricopeptide repeats and a U-box domain, structurally similar to the animal CHIP proteins. Plays an important role in plant cellular metabolism under temperature stress conditions. Functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment. | 0 |
| RefSeq | XP_037468471.1 | E3 ubiquitin-protein ligase CHIP-like [Triticum dicoccoides] | 0 |
| Q9SRS9 | E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana OX=3702 GN=CHIP PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SI23 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG036060.