HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC7BG034710
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
7B 392272952 392274985 - gene:TRIDC7BG034710
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.55 44,099.97 Da 44.91 81.24 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18280 BTB_POZ_BPM_plant 210 318 5.75864E-45 -
CDD cd00121 MATH 46 185 2.40997E-22 IPR002083
Pfam PF00651 BTB/POZ domain 214 322 3.0E-26 IPR000210
SUPERFAMILY SSF49599 TRAF domain-like 44 190 8.18E-25 -
SUPERFAMILY SSF54695 POZ domain 200 323 4.32E-30 IPR011333
Gene3D G3DSA:1.25.40.420 - 325 393 5.8E-16 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 44 188 1.9E-23 IPR008974
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 198 320 1.4E-36 IPR011333
SMART SM00225 BTB_4 222 326 3.9E-19 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 45 184 15.558307 IPR002083
ProSiteProfiles PS50097 BTB domain profile. 222 288 18.782301 IPR000210
MobiDBLite mobidb-lite consensus disorder prediction 1 23 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19000.1 BTB-POZ and MATH domain 1. 0
RefSeq XP_037466829.1 BTB/POZ and MATH domain-containing protein 3-like [Triticum dicoccoides] 0
Swiss-Prot Q8L765 BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 0
TrEMBL A0A453S0C1 Speckle-type POZ protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC7BG034710.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.