Basic Information
Locus ID:
gene:TRIDC7BG034430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 389257530 | 389262898 | + | gene:TRIDC7BG034430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 72,231.15 Da | 50.09 | 92.18 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 20 | 123 | 1.31796E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 27 | 117 | 4.5E-8 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 214 | 479 | 6.3E-95 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 130 | 2.75E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 18 | 145 | 2.9E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 126 | 5.9E-4 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 214 | 503 | 93.737747 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.647012 | IPR000210 |
| Coils | Coil | Coil | 547 | 581 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037463667.1 | BTB/POZ domain-containing protein At1g30440-like [Triticum dicoccoides] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6SLR3 | NPH3 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG034430.