Basic Information
Locus ID:
gene:TRIDC7BG033710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 382094673 | 382097766 | - | gene:TRIDC7BG033710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 38,397.25 Da | 58.70 | 71.37 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 231 | 243 | 1.3 | IPR001611 |
| Pfam | PF12937 | F-box-like | 26 | 73 | 2.7E-10 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 210 | 228 | 0.0076 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 84 | 7.98E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 113 | 247 | 7.06E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 80 | 269 | 8.4E-21 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 25 | 68 | 7.0E-10 | - |
| SMART | SM00367 | LRR_CC_2 | 121 | 146 | 220.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 147 | 172 | 26.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 207 | 231 | 96.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 232 | 258 | 160.0 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 23 | 71 | 10.239312 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 300 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05460.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_037468509.1 | putative F-box/LRR-repeat protein 23 [Triticum dicoccoides] | 0 |
| Q9S9V9 | Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6SFM7 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG033710.