Basic Information
Locus ID:
gene:TRIDC7BG033180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CR4
Description:
regulation of asymmetric cell division
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 375494226 | 375497853 | + | gene:TRIDC7BG033180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 97,298.72 Da | 44.04 | 83.42 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 509 | 778 | 8.47895E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 504 | 773 | 1.0E-43 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 25 | 277 | 9.16E-31 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 486 | 776 | 2.83E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 473 | 580 | 1.7E-30 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 65 | 327 | 2.3E-30 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 581 | 783 | 2.6E-56 | - |
| SMART | SM00220 | serkin_6 | 503 | 783 | 4.1E-30 | IPR000719 |
| SMART | SM00208 | TNFR_3 | 355 | 388 | 0.0048 | IPR001368 |
| ProSiteProfiles | PS50050 | TNFR/NGFR family cysteine-rich region domain profile. | 335 | 388 | 10.044001 | IPR001368 |
| ProSiteProfiles | PS50012 | Regulator of chromosome condensation (RCC1) repeat profile. | 178 | 217 | 8.9765 | IPR000408 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 503 | 780 | 36.131462 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 628 | 640 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 509 | 535 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 900 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59420.1 | crinkly4. Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes. | 0 |
| RefSeq | XP_037464564.1 | serine/threonine-protein kinase-like protein CR4 [Triticum dicoccoides] | 0 |
| Q75J39 | Serine/threonine-protein kinase-like protein CR4 OS=Oryza sativa subsp. japonica OX=39947 GN=CR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SK29 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG033180.