Basic Information
Locus ID:
gene:TRIDC7BG031060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 335517826 | 335522744 | + | gene:TRIDC7BG031060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 52,598.06 Da | 75.58 | 77.97 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 264 | 308 | 1.71786E-29 | - |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 266 | 306 | 8.4E-10 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 262 | 313 | 1.83E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 215 | 320 | 2.0E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 266 | 306 | 5.2E-10 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 266 | 307 | 14.112108 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 281 | 290 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 470 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74990.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037464469.1 | uncharacterized protein LOC119336532 [Triticum dicoccoides] | 0 |
| Q99942 | E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453RWN5 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG031060.