Basic Information
Locus ID:
gene:TRIDC7BG029770
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 302676350 | 302694326 | + | gene:TRIDC7BG029770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 69,505.34 Da | 37.10 | 93.30 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 68 | 5.5E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 306 | 575 | 1.0E-43 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 203 | 5.17E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 580 | 1.89E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 214 | 2.3E-61 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 274 | 381 | 8.5E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 599 | 6.2E-69 | - |
| SMART | SM00220 | serkin_6 | 305 | 579 | 7.8E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 305 | 592 | 36.852299 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 311 | 333 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_037464400.1 | LRR receptor kinase BAK1-like isoform X1 [Triticum dicoccoides] | 0 |
| B8BB68 | LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SJ77 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG029770.