Basic Information
Locus ID:
gene:TRIDC7BG027710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 262220395 | 262230505 | - | gene:TRIDC7BG027710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 72,754.57 Da | 42.51 | 76.39 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01927 | cyclophilin_WD40 | 496 | 643 | 3.64967E-112 | - |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 496 | 645 | 1.3E-56 | IPR002130 |
| Pfam | PF00400 | WD domain, G-beta repeat | 124 | 158 | 0.023 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 86 | 114 | 0.021 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 88 | 316 | 1.07E-29 | IPR036322 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 491 | 645 | 7.16E-69 | IPR029000 |
| Gene3D | G3DSA:2.130.10.10 | - | 70 | 177 | 2.7E-13 | IPR015943 |
| Gene3D | G3DSA:2.40.100.10 | - | 481 | 648 | 7.7E-77 | IPR029000 |
| Gene3D | G3DSA:2.130.10.10 | - | 178 | 340 | 1.0E-9 | IPR015943 |
| SMART | SM00320 | WD40_4 | 77 | 114 | 6.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 119 | 158 | 0.013 | IPR001680 |
| SMART | SM00320 | WD40_4 | 265 | 304 | 2.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 209 | 248 | 36.0 | IPR001680 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 491 | 645 | 37.614136 | IPR002130 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 83 | 114 | 9.505904 | IPR001680 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 529 | 546 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 534 | 546 | 6.7E-31 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 577 | 592 | 6.7E-31 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 605 | 620 | 6.7E-31 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 508 | 523 | 6.7E-31 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 592 | 604 | 6.7E-31 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44600.1 | cyclophilin71. Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3. | 0 |
| RefSeq | XP_037466991.1 | peptidyl-prolyl cis-trans isomerase CYP71-like [Triticum dicoccoides] | 0 |
| Q8W4D0 | Peptidyl-prolyl cis-trans isomerase CYP71 OS=Arabidopsis thaliana OX=3702 GN=CYP71 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SK81 | PPIase cyclophilin-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG027710.