Basic Information
Locus ID:
gene:TRIDC7BG027000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 258316888 | 258319933 | - | gene:TRIDC7BG027000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 31,016.38 Da | 50.95 | 58.57 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 234 | 275 | 5.34741E-18 | - |
| Pfam | PF13639 | Ring finger domain | 234 | 275 | 1.9E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 215 | 282 | 2.47E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 200 | 282 | 4.0E-23 | IPR013083 |
| SMART | SM00184 | ring_2 | 235 | 275 | 1.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 235 | 276 | 12.061441 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 131 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19910.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037466243.1 | E3 ubiquitin ligase BIG BROTHER-related-like [Triticum dicoccoides] | 0 |
| Q9LT17 | E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SE17 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG027000.