Basic Information
Locus ID:
gene:TRIDC7BG026560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
UBA-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 250505882 | 250511191 | - | gene:TRIDC7BG026560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.64 | 66,783.02 Da | 62.61 | 73.12 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01767 | UBX | 528 | 602 | 6.19359E-20 | - |
| CDD | cd14351 | UBA_Ubx1_like | 56 | 92 | 4.98379E-15 | - |
| Pfam | PF00789 | UBX domain | 524 | 602 | 2.7E-18 | IPR001012 |
| Pfam | PF14555 | UBA-like domain | 56 | 97 | 1.5E-13 | - |
| SUPERFAMILY | SSF46934 | UBA-like | 52 | 94 | 1.71E-7 | IPR009060 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 485 | 602 | 9.04E-23 | IPR029071 |
| Gene3D | G3DSA:1.10.8.10 | - | 47 | 98 | 2.9E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 523 | 604 | 4.6E-26 | - |
| SMART | SM00166 | ubx_3 | 519 | 603 | 3.3E-10 | IPR001012 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 522 | 600 | 18.740421 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 376 | - | - |
| Coils | Coil | Coil | 452 | 510 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11740.1 | Ubiquitin-like superfamily protein. Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein. | 0 |
| RefSeq | XP_044430261.1 | plant UBX domain-containing protein 8-like [Triticum aestivum] | 0 |
| F4JPR7 | Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUX8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SIN1 | UBX domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG026560.