Basic Information
Locus ID:
gene:TRIDC7BG025840
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 242287378 | 242292548 | + | gene:TRIDC7BG025840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 44,439.27 Da | 53.07 | 61.75 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 2 | 48 | 4.64653E-8 | - |
| Pfam | PF13639 | Ring finger domain | 2 | 48 | 5.4E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1 | 50 | 5.1E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 57 | 2.7E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 2 | 47 | 1.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 2 | 48 | 12.031935 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05545.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037469267.1 | E3 ubiquitin-protein ligase RFI2-like [Triticum dicoccoides] | 0 |
| Q5Z8R1 | E3 ubiquitin-protein ligase IPI1 OS=Oryza sativa subsp. japonica OX=39947 GN=IPI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SG59 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG025840.