Basic Information
Locus ID:
gene:TRIDC7BG024450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 222631289 | 222636457 | - | gene:TRIDC7BG024450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 118,077.01 Da | 49.54 | 62.51 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 427 | 1054 | 1.4E-39 | IPR001394 |
| SUPERFAMILY | SSF57850 | RING/U-box | 283 | 358 | 1.29E-5 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 423 | 1056 | 3.34E-65 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 412 | 623 | 2.1E-30 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 792 | 1061 | 3.4E-29 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 426 | 1057 | 35.439709 | IPR028889 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 290 | 362 | 10.697018 | IPR001607 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 99 | 168 | 12.420094 | IPR001607 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 427 | 442 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 856 | 917 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 819 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 853 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 799 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04860.1 | ubiquitin-specific protease 2. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037469240.1 | ubiquitin carboxyl-terminal hydrolase 16-like [Triticum dicoccoides] | 0 |
| Q8W4N3 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UBP2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6SDG1 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG024450.