Basic Information
Locus ID:
gene:TRIDC7BG024430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 222447147 | 222453190 | - | gene:TRIDC7BG024430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 53,845.60 Da | 43.81 | 59.51 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 265 | 400 | 1.5E-11 | IPR001394 |
| SUPERFAMILY | SSF57850 | RING/U-box | 119 | 194 | 1.48E-5 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 261 | 448 | 6.67E-23 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 257 | 459 | 5.3E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 90 | 212 | 1.5E-5 | IPR013083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 264 | 492 | 17.100185 | IPR028889 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 121 | 199 | 11.463449 | IPR001607 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 265 | 280 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 44 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037466606.1 | ubiquitin carboxyl-terminal hydrolase 2-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6SFV7 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG024430.